@cleerlycode/cornerstone-wado-image-loader
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Cornerstone ImageLoader for DICOM WADO-URI
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<title>Code coverage report for src/webWorker/decodeTask/decodeImageFrame.js</title>
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<a href="../../../index.html">all files</a> / <a href="index.html">src/webWorker/decodeTask/</a> decodeImageFrame.js
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<span class="strong">72.22% </span>
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<span class="cline-any cline-neutral"> </span></td><td class="text"><pre class="prettyprint lang-js">import decodeLittleEndian from './decoders/decodeLittleEndian.js';
import decodeBigEndian from './decoders/decodeBigEndian.js';
import decodeRLE from './decoders/decodeRLE.js';
import decodeJPEGBaseline from './decoders/decodeJPEGBaseline.js';
import decodeJPEGLossless from './decoders/decodeJPEGLossless.js';
import decodeJPEGLS from './decoders/decodeJPEGLS.js';
import decodeJPEG2000 from './decoders/decodeJPEG2000.js';
function decodeImageFrame (imageFrame, transferSyntax, pixelData, decodeConfig, options) {
const start = new Date().getTime();
if (transferSyntax === '1.2.840.10008.1.2') {
// Implicit VR Little Endian
imageFrame = decodeLittleEndian(imageFrame, pixelData);
} else if (transferSyntax === '1.2.840.10008.1.2.1') {
// Explicit VR Little Endian
imageFrame = decodeLittleEndian(imageFrame, pixelData);
} else if (transferSyntax === '1.2.840.10008.1.2.2') {
// Explicit VR Big Endian (retired)
imageFrame = decodeBigEndian(imageFrame, pixelData);
} else <span class="missing-if-branch" title="if path not taken" >I</span>if (transferSyntax === '1.2.840.10008.1.2.1.99') {
// Deflate transfer syntax (deflated by dicomParser)
<span class="cstat-no" title="statement not covered" > imageFrame = decodeLittleEndian(imageFrame, pixelData);</span>
} else if (transferSyntax === '1.2.840.10008.1.2.5') {
// RLE Lossless
imageFrame = decodeRLE(imageFrame, pixelData);
} else if (transferSyntax === '1.2.840.10008.1.2.4.50') {
// JPEG Baseline lossy process 1 (8 bit)
imageFrame = decodeJPEGBaseline(imageFrame, pixelData);
} else <span class="missing-if-branch" title="if path not taken" >I</span>if (transferSyntax === '1.2.840.10008.1.2.4.51') {
// JPEG Baseline lossy process 2 & 4 (12 bit)
<span class="cstat-no" title="statement not covered" > imageFrame = decodeJPEGBaseline(imageFrame, pixelData);</span>
} else <span class="missing-if-branch" title="if path not taken" >I</span>if (transferSyntax === '1.2.840.10008.1.2.4.57') {
// JPEG Lossless, Nonhierarchical (Processes 14)
<span class="cstat-no" title="statement not covered" > imageFrame = decodeJPEGLossless(imageFrame, pixelData);</span>
} else if (transferSyntax === '1.2.840.10008.1.2.4.70') {
// JPEG Lossless, Nonhierarchical (Processes 14 [Selection 1])
imageFrame = decodeJPEGLossless(imageFrame, pixelData);
} else <span class="missing-if-branch" title="else path not taken" >E</span>if (transferSyntax === '1.2.840.10008.1.2.4.80') {
// JPEG-LS Lossless Image Compression
imageFrame = decodeJPEGLS(imageFrame, pixelData);
} else <span class="cstat-no" title="statement not covered" >if (transferSyntax === '1.2.840.10008.1.2.4.81') {</span>
// JPEG-LS Lossy (Near-Lossless) Image Compression
<span class="cstat-no" title="statement not covered" > imageFrame = decodeJPEGLS(imageFrame, pixelData);</span>
} else <span class="cstat-no" title="statement not covered" >if (transferSyntax === '1.2.840.10008.1.2.4.90') {</span>
// JPEG 2000 Lossless
<span class="cstat-no" title="statement not covered" > imageFrame = decodeJPEG2000(imageFrame, pixelData, decodeConfig, options);</span>
} else <span class="cstat-no" title="statement not covered" >if (transferSyntax === '1.2.840.10008.1.2.4.91') {</span>
// JPEG 2000 Lossy
<span class="cstat-no" title="statement not covered" > imageFrame = decodeJPEG2000(imageFrame, pixelData, decodeConfig, options);</span>
} else {
<span class="cstat-no" title="statement not covered" > throw new Error(`no decoder for transfer syntax ${transferSyntax}`);</span>
}
/* Don't know if these work...
// JPEG 2000 Part 2 Multicomponent Image Compression (Lossless Only)
else if(transferSyntax === "1.2.840.10008.1.2.4.92")
{
return decodeJPEG2000(dataSet, frame);
}
// JPEG 2000 Part 2 Multicomponent Image Compression
else if(transferSyntax === "1.2.840.10008.1.2.4.93")
{
return decodeJPEG2000(dataSet, frame);
}
*/
const shouldShift = imageFrame.pixelRepresentation !== undefined && imageFrame.pixelRepresentation === 1;
const shift = (shouldShift && imageFrame.bitsStored !== undefined) ? (32 - imageFrame.bitsStored) : undefined;
if (shouldShift && shift !== undefined) {
for (let i = 0; i < imageFrame.pixelData.length; i++) {
// eslint-disable-next-line no-bitwise
imageFrame.pixelData[i] = (imageFrame.pixelData[i] << shift >> shift);
}
}
const end = new Date().getTime();
imageFrame.decodeTimeInMS = end - start;
return imageFrame;
}
export default decodeImageFrame;
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